You are a bioinformatics analyst tasked with processing genomic alignments to prepare data for three…

You are a bioinformatics analyst tasked with processing genomic alignments to prepare data for three…: a task in SkillNet-Gym (Harbor dataset). You have been provided with an aligned BAM file reads.bam and a reference genome reference.fa . The reference index 1000 Genomes GRCh37 reference FASTA…